BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B01LP1|AL428157
(1032 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1095 1066 0.0
>3x_Contig1095
Length = 5701
Score = 1066 bits (537), Expect = 0.0
Identities = 552/555 (99%), Gaps = 2/555 (0%)
Strand = Plus / Plus
Query: 480 ggtgaaggctgttgaaccagaatctagctccgattccagctctgattctagctctgattc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4063 ggtgaaggctgttgaaccagaatctagctccgattccagctctgattctagctctgattc 4122
Query: 540 tagctctgattctagctctgattcctcttctgattccgattcttcttcctcttctgactc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4123 tagctctgattctagctctgattcctcttctgattccgattcttcttcctcttctgactc 4182
Query: 600 ttctgactcttctgacgaagaagaagaaccaaagaaggaaactaagaaggaagaatcttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4183 ttctgactcttctgacgaagaagaagaaccaaagaaggaaactaagaaggaagaatcttc 4242
Query: 660 ctctgattccgaatcctcttctgattctgattccgaatctgaaaaggaagaagctaagaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4243 ctctgattccgaatcctcttctgattctgattccgaatctgaaaaggaagaagctaagaa 4302
Query: 720 agaagaatcctccgattctgactcttcttccgactcctcctcagactccgactctgattc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4303 agaagaatcctccgattctgactcttcttccgactcctcctcagactccgactctgattc 4362
Query: 780 tgacgaagaagaagaaaagaaggaggaaaagaagaaggaagaatcttccgcttcttcatc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4363 tgacgaagaagaagaaaagaaggaggaaaagaagaaggaagaatcttccgcttcttcatc 4422
Query: 840 tgattctgattcttcatctgattctgactcttcatctgatgacgatgaagaagaggaaaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4423 tgattctgattcttcatctgattctgactcttcatctgatgacgatgaagaagaggaaaa 4482
Query: 900 aagctctaacaagcgtaaggctgatgatgacgaagagaaatctgaaagcaaaaagccaaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4483 aagctctaacaagcgtaaggctgatgatgacgaagagaaatctgaaagcaaaaagccaaa 4542
Query: 960 gactgaattggctggtgaa-cagctactattttcgttggtagactatcatggt-cmttga 1017
||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||
Sbjct: 4543 gactgaattggctggtgaaccagctactattttcgttggtagactatcatggtccattga 4602
Query: 1018 cgatgaatggttaaa 1032
|||||||||||||||
Sbjct: 4603 cgatgaatggttaaa 4617
Score = 889 bits (448), Expect = 0.0
Identities = 449/450 (99%)
Strand = Plus / Plus
Query: 1 gatcagaggaatacaaccttggagagaacgcaktcgcgcgccagaaattaaaagaaccca 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3584 gatcagaggaatacaaccttggagagaacgcagtcgcgcgccagaaattaaaagaaccca 3643
Query: 61 tacctcgcaccaaattatcacgaattttcatggtaatttcttttcaataaaaaatgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3644 tacctcgcaccaaattatcacgaattttcatggtaatttcttttcaataaaaaatgtgat 3703
Query: 121 gaaaagttttttcagtgaaaaaaacccaaacaaaaacggaaaagaaacgatttaagtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3704 gaaaagttttttcagtgaaaaaaacccaaacaaaaacggaaaagaaacgatttaagtgaa 3763
Query: 181 aaattattgtctctgtactcttcagctcatcgcattggaaaaagaagtttgttataagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3764 aaattattgtctctgtactcttcagctcatcgcattggaaaaagaagtttgttataagag 3823
Query: 241 aagataagttatacctgctcagtaacacttcttcattaactaacatttattgatataacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3824 aagataagttatacctgctcagtaacacttcttcattaactaacatttattgatataacg 3883
Query: 301 ctattttgaaacgcaattcttgtagcatcgagtcttgttgattatctattaacagagtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3884 ctattttgaaacgcaattcttgtagcatcgagtcttgttgattatctattaacagagtac 3943
Query: 361 agaataatatcatcgctcaaacatacaattcacataatgggtaaatcaactgacaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3944 agaataatatcatcgctcaaacatacaattcacataatgggtaaatcaactgacaagaag 4003
Query: 421 gtttccaagaaggtttccaagaaggaccta 450
||||||||||||||||||||||||||||||
Sbjct: 4004 gtttccaagaaggtttccaagaaggaccta 4033
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,797
Number of Sequences: 1807
Number of extensions: 14797
Number of successful extensions: 273
Number of sequences better than 1.0e-20: 1
length of query: 1032
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1016
effective length of database: 10,329,639
effective search space: 10494913224
effective search space used: 10494913224
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)